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Rob: Greetings.
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Welcome back.
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As promised earlier, we're going to take a look today at the many ways
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that molecules can interact with one another.
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Let's dive right in.
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All right.
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You already know how to tell if a molecule is polar or nonpolar.
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Now it's time to put that knowledge to good use.
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Pictured here are sucrose, sweet, sweet table sugar, and limonene, the
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chemical responsible for one of my favorite smells, citrus.
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So we can look at these molecules and tell that sucrose is polar due to the
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many OH groups and that limonene is nonpolar.
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It is made completely out of Cs and Hs.
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But what does that mean when I put sucrose next to limonene?
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Will they attract each other?
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Maybe repel?
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Let's take a look at intermolecular bonds, bonds formed
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between separate molecules.
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There are four types we'll cover--
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ionic bonds, hydrogen bonds, van der Waals forces, and
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the hydrophobic effect.
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Let's start our journey with ionic bonds.
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A couple of the functional groups we've discussed before, the amine
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group and the carboxyl group, sometimes become
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charged at certain pHs.
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The amine grabs a hydrogen and the nitrogen becomes positively charged
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while the carboxyl loses a hydrogen and the oxygen
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becomes negatively charged.
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Now as the old saying goes, opposites attract.
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A strong attraction called an ionic bond forms between the two charged
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functional groups.
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If I put two positively charged groups near each other, they
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will repel each other.
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Same idea goes for two negative charges.
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It's all a lot like magnets.
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The next type of bond we'll discuss is the hydrogen bond.
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The best molecule to use as an example is extremely simple, water--
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nothing but two hydrogens and an oxygen.
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Water is polar.
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Oxygen is much more electronegative than hydrogen and it has a partial
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negative charge while the hydrogens have partial positive charges.
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So if another water is nearby it can arrange itself so that a partial
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positive is near a partial negative, which is a favorable interaction.
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Remember, opposites attract.
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Much like ionic bonds, we can show these hydrogen bonds with little
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dotted lines.
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The official definition of a hydrogen bond is the attraction between a polar
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hydrogen atom in one functional group and an electronegative atom like
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nitrogen or oxygen in another functional group.
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We can zoom in on the three most important atoms in an example, two
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electronegative atoms with a hydrogen in the middle.
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It's kind of like a hydrogen sandwich with the two electronegative atoms
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acting as the bread.
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Hydrogen bonds are very strong, but not quite as strong as ionic bonds.
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Hydrogen bonds also explain why water has surface tension and tends to bead
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up on waxy surfaces.
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It likes to interact with itself because it can make these oodles of
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hydrogen bonds.
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So hydrogen bonding can be used to explain whether or not a molecule can
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dissolve in water.
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Polar molecules are hydrophilic, which means they like to
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interact with water.
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Here I'm showing sucrose again.
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Look at all the hydrogen bonds we can form with water, and I'm only drawing
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a few of the many possibilities.
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As a result, you can dissolve quite a bit of sugar in water.
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What about nonpolar molecules?
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So most of you are aware that oil and water don't mix.
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Why is that?
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So if I have a container with water and vegetable oil, I can shake it up
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and I get the oil to enter the water as small droplets.
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But if I let it sit for a minute, it goes back to separate
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oil and water layers.
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Let's zoom in to the level of individual molecules.
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Water doesn't like to interact with oil, which is nonpolar and can't form
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hydrogen bonds.
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So oil is labeled hydrophobic, water fearing.
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Water does like to interact with other waters, though, so the oil's just
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getting in the way, preventing water molecules from
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interacting with each other.
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So over time, the water's pushed the oils together and out of the way so
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they can hydrogen bond with each other.
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This is the essence of the third type of interaction between molecules, the
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hydrophobic affect.
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Hydrophobic molecules clump together to avoid disrupting hydrogen bonds
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between water molecules.
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We'll later see how hydrophobic effects are essential for forming the
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membranes that enclose each of the cells in our body.
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Last but not least are Van der Waals forces.
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These occur every time that atoms of any type are very close together.
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Sometimes a number of electrons from an atom move to one side of that atom
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giving a tiny dipole of positive and negative charges.
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If there's another atom that is very close, it will shift its electrons to
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match the dipole from its neighbor.
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Now we have tiny positive charges interacting with tiny negative charges
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for a split second before the electrons return to a more balanced
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configuration.
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Van der Waals forces are kind of the underdog.
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They are very weak compared to the other types of bonds we've discussed.
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Even though they are found between all neighboring atoms, they won't matter
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much if another type of bond like hydrogen or ionic can be formed
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between those atoms.
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However, they can be quite significant when a lot of them work together.
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For example, van der Waals force are what geckos use to hold on to smooth
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vertical glass surfaces.
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They have specialized toes with tons of little hairs that provide a lot of
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surface area to maximize the number of van der Waals
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attractions that can be formed.
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Now we've gone through all of the different types of
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intermolecular bonds.
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So let's practice a little bit.
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Pause the video for a moment and try to identify the strongest type of
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interaction found within each labeled circle.
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Ready to check your work?
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Let's do it.
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I've listed all of the possibilities at the bottom for each case.
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Number one, a nonpolar methyl group and a polar hydroxyl group.
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They can't form an ionic bond--
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there's no charge.
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No hydrogen bond, because there's only an electronegative atom on one side of
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the hydrogen--
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can't make a sandwich with only one slice of bread.
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What about the hydrophobic effect?
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Nope.
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One of our groups is polar and hydrophilic.
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That leaves us with van der Waals.
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If all else fails, there's always the possibilities of van der Waals
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interaction.
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Number two, a polar CO double bond and a polar OH group.
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Ionic?
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Nope, no charge.
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What about hydrogen bonding?
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Looks good.
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Hydrogen in between two electronegative atoms-- we got it.
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Number three, two oppositely charged groups.
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Look no further--
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textbook ionic bonding.
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Number four.
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I know there's only one answer left, but let's think for a second about why
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the hydrophobic effect makes sense.
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There's no charges for ionic bonding, so we can cross that off, there's no
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polar groups, so we can't hydrogen bond, but we do have a big region of
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hydrophobic hydrocarbon tails.
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So they'll clump together to avoid disrupting the hydrogen bonds that the
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surrounding water molecules make with each other.
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Perfect.
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As we talk about larger molecules like proteins later in the unit, this
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knowledge will come in real handy for explaining why these molecules are
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behaving the way that they do.
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Now that you have some of the basics down, enjoy the rest of biochemistry.
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