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PETER REDDIEN: What we're going to do
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is work with something that has some characteristic that
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looks--
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instead of being some kind of continuous characteristic,
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something that's a state, like a discrete state, where
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individuals either have the state or they
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don't have this state, all right?
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So that's one choice we're going to make
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to try to understand some of these core genetic principles.
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So what we're going to look at is the phenotype
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of an organism, which I'm going to begin some
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of our definitions today that we'll
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be using throughout the class.
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So phenotype refers to the characteristics
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of an organism, essentially all the characteristics
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of an organism.
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Its common usage will be referring
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to some characteristic under observation.
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So we'll start with some example that we'll use today.
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So let's say we want to figure this out
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and we decide to work with fruit flies.
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So we go outside, let's say, and we look for some trait.
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We need something that's variant between different individuals
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in a population.
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If everything looks the same, then we're
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never going to be able to figure anything out.
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So we look for some discrete state
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that looks different in some of the flies, all right?
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So now let's say we find a fly that is not moving very well.
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So we'll have a fruit fly that is paralyzed.
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We see it moving a little bit so we know it's still alive,
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but it's not moving very well.
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So now we're going to try to-- the idea is now
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we have something different in this group of flies.
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And we want to use that to try to figure out
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how we explain this trait.
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So what-- first, let's start with this.
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So why could the fly be paralyzed?
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Any hypotheses?
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Yeah.
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It could be injured.
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Any other ideas?
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Yeah, in the back.
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STUDENT: [INAUDIBLE].
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PETER REDDIEN: Say again.
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STUDENT: Mutations in actin.
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PETER REDDIEN: So it could be-- you've
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got a very specific hypothesis.
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It could be a mutation in actin filament protein.
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But we could generalize that and say
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it could have some mutation in something that's
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important for movement.
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So, yeah, it could have a mutation or multiple mutations.
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Anything else?
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Yeah.
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STUDENT: Side effect of some virus.
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PETER REDDIEN: Infection.
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It could be some kind of infection.
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So maybe this fly was infected by some virus or something
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else.
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Could be old.
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So anyway there's a number of things that could
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have happened to this fly.
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And we could group a number of these categories
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as environmental influences, like infection, accident,
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things like that.
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And then we could have a set of hypotheses
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around genetic, heritable-based mechanisms
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to explain this difference.
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And one of the complexities in real world genetics
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is that environmental exposures to things, experiences
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can influence some phenotypes.
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Nonetheless, most phe-- attributes of an organism
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have a very strong heritable component.
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We'll get into this later in the course.
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